Added basic orchestration script, apply defaults before checking for missing fields

.gitignore

@@ -3,3 +3,6 @@
 .\#*
 .projectile
 TAGS
+
+composer.lock
+vendor/

devel.sh

@@ -0,0 +1,47 @@
+#!/bin/bash
+
+function tidy {
+    rm -vf {./,tests/,src/{./,AntiCSRF/,Clock/,Hash/,Request/,Required/,RFC/,Session/,URI/,Workflow/}}*~
+    rm -vf {./,tests/,src/{./,AntiCSRF/,Clock/,Hash/,Request/,Required/,RFC/,Session/,URI/,Workflow/}}#*#
+}
+
+function clean {
+    if [[ ! -d "vendor/" ]]; then
+        echo "No vendor/ folder to remove."
+    else
+        echo "Removing ./vendor/ ..."
+        rm -rf "vendor/"
+        echo "Done"
+    fi
+    rm -fv "composer.lock"
+}
+
+function update {
+    composer update
+    composer dumpautoload -v
+}
+
+if [[ $# -ne 1 ]]; then
+    echo "This script requires a verb."
+    echo "VERBS:"
+    echo " update - Update dependencies with composer"
+    echo " test   - If no vendor/ folder Update, then run phpunit tests."
+    echo " clean  - Remove all buildfiles and editor artifacts."
+    echo " tidy   - Remove all editor artifacts."
+fi
+
+cmd=$1
+if [[ $cmd == "update" ]]; then
+    update
+elif [[ $cmd == "test" ]]; then
+    if [[ ! -d "vendor/" ]]; then
+        update
+    fi
+    ./vendor/bin/phpunit --testdox tests
+elif [[ $cmd == "tidy" ]]; then
+    tidy
+elif [[ $cmd == "clean" ]]; then
+    tidy && clean
+else
+    echo "Unrecognized verb: ${cmd}"
+fi

src/URI/Otpauth.php

@@ -55,11 +55,6 @@ class Otpauth
             { return \array_key_exists('secret', $que);},
                 $parsedUri['query'] . "has no secret key."],
         ];
-
-        $parsedQuery = [];
-        \parse_str($parsedUri['query'], $parsedQuery);
-        $runCheck($queryChecks, $parsedQuery);
-
         $labelChecks = [
             [ function($lab)
             { return \count($lab) === 2;},
@@ -69,6 +64,9 @@ class Otpauth
         $label = \explode(":", $parsedUri['path']);
         $runCheck($labelChecks, $label);
 
+        $parsedQuery = [];
+        \parse_str($parsedUri['query'], $parsedQuery);
+
         $queryDefaults = [
             "algorithm" => "SHA1",
             "period" => "30",
@@ -76,6 +74,7 @@ class Otpauth
             "issuer" => \rawurldecode(\ltrim($label[0], "/")),
         ];
         $parsedQuery = \array_merge($queryDefaults, $parsedQuery);
+        $runCheck($queryChecks, $parsedQuery);
 
         $convertFields = function(array $conversion, array &$target) {
             foreach ($conversion as $k => $v)

tests/URITest.php

@@ -7,7 +7,7 @@ use BradyMcD\TAATP\URI\Otpauth;
 /** @SuppressWarnings(PHPMD.StaticAccess)*/
 final class URITest extends TestCase
 {
-    public function testExampleURI(): void
+    public function testPreservesAllUriFields(): void
     {
         // Sourced from Google's otpauth URI specification
         // https://github.com/google/google-authenticator/wiki/Key-Uri-Format
@@ -48,9 +48,9 @@ final class URITest extends TestCase
         $this->assertEqualsCanonicalizing($parsedOtpQuery, $parsedTestQuery);
     }
 
-    public function testIncompleteURI(): void
+    public function testCanFallbackToDefaults(): void
     {
-        $string = 'otpauth://totp/Example:john.doe@email.com?secret=HXDMVJECJJWSRB3HWIZR4IFUGFTMXBOZ&issuer=Example';
+        $string = 'otpauth://totp/Example:john.doe@email.com?secret=HXDMVJECJJWSRB3HWIZR4IFUGFTMXBOZ';
         $queryComponents = [ "secret" => "HXDMVJECJJWSRB3HWIZR4IFUGFTMXBOZ",
                              "issuer" => "Example",
                              "algorithm" => "SHA1",
@@ -65,6 +65,7 @@ final class URITest extends TestCase
         $this->assertSame($provisioningUri->algorithm, $queryComponents['algorithm']);
         $this->assertSame($provisioningUri->digits, $queryComponents['digits']);
         $this->assertSame($provisioningUri->period, $queryComponents['period']);
+        $this->assertSame($provisioningUri->issuer, $queryComponents['issuer']);
     }
 }