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Brady McDonough 5cab0ea229
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3 years ago
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data First section complete 3 years ago
README.md Markdown 3 years ago
Steamgen dataset.ipynb First section complete 3 years ago
portable.py First section complete 3 years ago

README.md

1 - STUMPY Basics

Above what was seen in the tutorial I started on a general purpose motif function which takes the dataset and a computed matrix profile and returns the top motif it discovered and all locations where that motif appears. It does not return overlapping motifs.

TODO

I remember reading that the distances returned by a matrix profile have an upper bound. I should see what calculating my distance cutoff with that upper bound looks like rather than calculating off the top motif like I do now.

If two motifs overlap it could be that the window is too small. I don't know what other criteria to test yet to tell me if that is the case or not. I do know that this can be determined in discovery stages using a Pan-matrix profile (PMP).

Some form of reference following should occur to ensure that I'm grabbing motifs which actually relate to one another.

Currently the function is quite primitive. It should be packaged and iterated on using the data in further sections of the tutorial.